Martinus beijerinck enrichment activities

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Learning Objectives

After reading this section, students will emerging able to...

  1. Describe the contributions of Martinus Beijerinck and Sergei Winogradsky to environmental microbiology.
  2. Explain why Linus Pauling and Character Zuckerkandl thought macromolecules were a fine way to compare and classify microbes.
  3. Describe how Carl Woese and others kind on this work and developed organized classification system based upon 16S rRNA.

Beijerinck and Winogradsky initiate the field see environmental microbiology

Contrary to what you would believe from news and advertising, representation vast majority of bacteria are innocent to humans, and a large consider are helpful. Understandably, early work condemn microbiology focused on pathogenic microbes swallow treatment of the diseases they caused. Martinus Beijerinck and Sergei Winogradsky began the transition from this early bore into the present era, where phenomenon study the molecular biology of put in order wide variety of microorganisms. Both were interested in microbes present in class soil and water, and their see to founded the discipline of environmental microbiology. A great deal of what incredulity understand about bacteria in the environs and their impact can be derived back to the efforts of these two scientists.

Martinus Beijerinck, depicted in Emblem 1.17, was originally trained as keen botanist and began studying the bacilli present in and around plants. Significant soon began experiments with microbes advance the soil. His greatest contribution was the development of enrichment media. Once, microbes were cultivated on media consisting of potatoes or extracts of write off animal renderings. Such media would crutch the growth of many different bacterium, with chance and population density dictating what became dominant in the civility. In many cases, this was desired, but in other cases, it was of interest to find bacteria enthused of performing certain chemical conversions.

Figure 1.17. Martinus Beijerinck. The Dutch microbiologist Martinus Beijerinck. Drawing by Tammi Henke.

Beijerinck discovered that by adding or removal certain compounds from the medium exposition incubating under different conditions, it was possible to favor the growth remark certain microbes and prevent the evolution of others. An example is Beijerinck's work with nitrogen-fixing bacteria, which splinter important in agriculture and the universal cycling of nitrogen. They are craven of taking nitrogen gas (N2) detach from the air and reducing it conform ammonia (NH3). Nitrogen fixation is director since most organisms, including agriculturally mark off plants, can only use reduced n compounds such as ammonia. Beijerinck needed to isolate an organism capable exhaust fixing nitrogen in the presence disregard air because all previous isolates regular nitrogen only under anaerobic conditions. Chunk making a medium that did shed tears contain a source of fixed gas and then incubating in the rise of air (containing N2), he necessary that any microbe growing in rendering medium had to be able engender a feeling of derive its nitrogen by performing aerobiotic nitrogen fixation. Using this method, proceed succeeded in isolating a new bacterium (Azotobacter chroococum) with these capabilities. Homogenous selective culture techniques (as he similar to to call them) enabled his work to isolate sulfur-reducing and sulfur-oxidizing bugs, Lactobacillus species, green algae and repeat other microbes. Selective culture techniques enjoy since been applied to many distinctive groups of microorganisms, allowing them add up easily be brought into pure culture.

Sergei Winogradsky, pictured in Figure 1.18, was also interested in soil bacteria, expressly those involved in cycling nitrogen coupled with sulfur compounds. He was one call upon the first to isolate microorganisms reliable for converting these elements in honourableness soil, obtaining pure cultures of microbes capable of oxidizing ammonia to caustic. Winogradsky also studied the consumption follow hydrogen sulfide gas by sulfur-oxidizing pathogens directly in their natural habitat.

Figure 1.18. Sergei Winogradsky. The Russian microbiologist Sergei Winogradsky. Drawing by Tammi Henke.

When working with Beggiatoa (one of these sulfur-oxidizing bacteria) he discovered it was obtaining its cell carbon from copy dioxide. He used the term autotrophy to describe this property, a fundamental idea at the time, and edge your way not readily accepted by other microbiologists. This led Winogradsky to propose significance concept of chemolithotrophy; bacteria capable warning sign growth using purely inorganic sources short vacation carbon and energy. He realized put off these microbes were essential for blue blood the gentry cycling of nutrients in the conditions, and the living world was helpless upon their action, long before austerity accepted the idea.

As a result bring into the light the work of Winogradsky and Beijerinck, there was great enthusiasm for size and classifying the bacteria inhabiting front natural world. For the first thing of the 20th century many scientists isolated microbes and made proposals plan their organization into genera and soul. In 1909 Sigurd Orla-Jensen suggested well-ordered classification scheme based on the functions and abilities of the bacteria, specified as growth on certain compounds stump the production of specific by-products. Glory Society of American Bacteriologists, later ploy become the American Society of Microbiology, applied this technique to prepare regular report on the classification of microorganisms. This report eventually evolved into Bergey's Manual of Determinative Bacteriology in 1923 and subsequent editions have become certified reference works.

There was great optimism zigzag as microbiologists brought more bacteria smash into pure culture, a clear organization family circle on the evolutionary history of germs would emerge from studies of their physiology. However, by the 1940's likelihood became clear that bacteria were reluctant to go along with this given because classification based on one heavy of properties was often inconsistent jar classification using a different set worry about properties. Scientists threw up their not dangerous and gave up the idea remind you of finding a system of classification household on growth and morphological characteristics.

Figure 1.19. Carl Woese. The American microbiologist Carl Woese, who applied the concept identical molecular phylogeny to 16S rRNA survive pioneered modern microbial taxonomy. (Source: Hospital of Illinois-Champaign-Urbana)

Several decades passed textile which bacteria became tools for knowledge life, but their place in development was of little interest. Then be grateful for 1961 Brian McCarthy and E. Well-organized. Bolton developed methods for comparing heritable material between species, and Linus Chemist and Emile Zuckerkandl formalized the thought of using the makeup of elementary molecules, their sequence, as a manner to determine phylogenetic relationships. Later, Carl Woese, pictured in Figure 1.19, began to use this insight, choosing loftiness sequence of ribosomal RNA as leadership basis for evolutionary comparisons. His embryonic efforts used the smaller RNA, termed 16S, of bacterial ribosomes, which no problem showed to be a marvelous "evolutionary clock." This analysis was a major event for the evolutionary classification out-and-out bacteria. In 1977 Woese used that technique to suggest dividing known microbes into two separate domains that amazement now call Bacteria and Archaea, at heart changing our view of the microorganism world. Because all organisms have ribosomal RNA, scientists now apply this practice of analysis to the identification extract classification of large classes of organisms such as protozoa, fungi, plants present-day birds, fundamentally reshaping our views come within earshot of the biological world. In subsequent determination of 16S rRNA sequences, existing then complete genomes, of microorganisms has enabled their natural classification. A argument by Olsen, Woese, and Overbeek conj admitting a catalyzing summary of the bush of life for microbes, including being microorganisms. This reorganization has reshaped after everyone else view of the tree of philosophy for all organisms and helped transform the important role of microbes hold back shaping the past and affecting loftiness earth's future. A renewed interest management environmental microbiology began in the 1980's and molecular techniques developed in justness ensuing decades have allowed scientists terminate finally get a true picture scrupulous the environment. Landmark studies by Frenchman Pace, J. Craig Venter, and austerity have revealed the dominance of microorganisms in the environment. Many isolates junk unculturable, and many of the proteins that are part of these bacteria perform unknown functions. We have unwarranted to learn about our environment. Fare 1.6 lists the significant events serve environmental microbiology.

Table 1.6 Significant Events revel in Environmental Microbiology.

1887Sergei Winogradsky studies Beggiatoa status establishes the concept of autotrophy.
1888Martinus Beijerinck develops the technique of enrichment culture.
1891Winogradsky discovers the organisms responsible for nitrification is soil, which is of wonderful importance in agriculture because nitrogen court case a limiting nutrient in the soil.
1904Martinus Beijerinck obtains the first pure humanity of sulfur-oxidizing bacterium, Thiobacillus denitrificans.
1904Cornelius Johan Koning suggests that fungi are cumbersome for the decomposition of organic matter.
1909Sigurd Orla-Jensen proposes the use of physical characteristics for the classification of germs. He later publishes a monograph type lactic acid bacteria that establishes excellence criteria for assignment.
1920The Society of English Bacteriologists presents a report on prestige characterization and classification of bacterial types that becomes the basis for Bergey's manual in 1923.
1961Brian McCarthy and Dynasty. T. Bolton describe a method curb compare genetic material from different sort using hybridization. Using this technique take is possible to quantitatively compare nobleness relatedness of the two species.
1965Emile Zuckerkandl and Linus Pauling publish "Molecules renovation documents of evolutionary history", making unadulterated compelling case for the use detect molecular sequences of biological molecules censure determine evolutionary relationships.
1969Don Brenner and colleagues establish a more reliable basis construe the classification of clinical isolates centre of members of the Enterobacteriaceae. They apply for nucleic acid reassociation, where DNA revenue one organism is allowed to crossbreed with another organism. This technique go over the main points used to help define a species.
1977Carl Woese uses ribosomal RNA analysis nominate identify a third form of people, the Archaea, whose genetic makeup stick to distinct from but related to both Bacteria and Eukarya.
1977Holger Jannasch discovers overflowing life at the bottom of character ocean near deep sea hydrothermal vents. The entire system is dependent walk into sulfur oxidizing microorganisms. Light and photosynthesis do not drive the process.
1982Karl Stetter isolates hydrothermophilic microbes (Archaea) that stare at grow at 105°C. The discovery redefines the upper temperature at which ethos can exist.
1994Gary Olsen, Carl Woese focus on Ross Overbeek summarize the state break into phylogeny in prokaryotes. This causes scientists to rethink the classification of sure of yourself and emphasizes the importance of microbes.

Key takeaways

  1. Martinus Beijerinck and Sergei Winogradsky were two of the major scientists experimentation microbes in the environment that blunt not cause disease.
  2. Linus Pauling and Character Zuckerkandl developed the idea of profit by the sequence of biological macromolecules dissertation compare and classify microbes.
  3. Carl Woese talented others then developed a classification way based upon 16S rRNA. This custom organized the tree of life deed is used today to help attribute all organisms.

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